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Homo sapiens
Homo sapiens
Cell lines
  • B cell lymphoma (mix of SUDHL-4, SUDHL-6, RCK8) ref: [BCLY]
  • Bone marrow endothelial cells (HBMEC) ref: [HBMEC]
  • Breast tumor epithelial cells (mix of T47D, MDA-MB-468, MCF7, BT20) ref: [HBEC]
  • Brown adipocytes (differentiated PAZ6) ref: [PZD]
  • Colon tumor epithelial cells (mix of Caco2, HCA7, Colo205, SW480) ref: [HCCA]
  • Colorectal carcinoma cells (HCT116) ref: [HCT116TO]
  • Ewing's sarcoma cells ref: [HSEG]
  • HeLa cells ref: [HeLa]
  • Lung tumor cells (mix of A549, H1703, H460) ref: [HLUC]
  • Podocytes ref: [HPO]
  • Pre-adipocytes (undifferentiated PAZ6) ref: [PZU]
  • Prostate tumor cells (mix of PC3, DU145, PNT1A, LNCaP) ref: [HPRC]
  • T-cells (CEMC7) ref: [CEMC7]
  • Umbilical vein endothelial Cells (HUVEC) ref: [HUVEC]
  • Umbilical vein endothelial Cells, stressed & unstressed (HUVEC) ref: [HSCUV]
Primary Cells
  • Fibroblasts ref: [HF]
  • Hepatocytes ref: [PHH]
  • Leukocytes + activated mononuclear cells ref: [HLMA]
  • Macrophages (mix of Pam3CSK4 induced and IFNß induced) ref: [HMIN]
  • Macrophages (non induced) ref: [MAC]
  • Melanocytes ref: [HML]
  • Thymocytes (mix of CD4+ and CD8+) ref: [HTH]
Tissues
  • Brain adult ref: [HBR]
  • Brain fetal (entorhinal cortex and hippocampus) ref: [HFHIT]
  • Brain fetal ref: [HFBR]
  • Breast ref: [HBT]
  • Colon ref: [HCN]
  • Heart adult/fetal ref: [HVEH]
  • Langerhans islets ref: [HISL]
  • Liver ref: [HLV]
  • Lung ref: [HNL]
  • Muscle skeletal adult/fetal ref: [HMAF]
  • Pancreas ref: [HPS]
  • Placenta ref: [PLA]
  • Reconstituted skin (Episkin) ref: [EpiSkin]
  • Retina ref: [HRET]
  • Testis ref: [HTestis]
Plants
Arabidopsis thaliana
Tissues
  • Flower ref: [ATFO]
  • Meiotic bud ref: [ATMB]
  • Mixed leaves, TYMV infected, flg22 infiltrated ref: [AIFT]
  • Organ boundary cells of inflorescence ref: [ATOBC]
  • Rosette leaf, P. syringae infected ref: [AIPS]
  • Seedling (one-week old) ref: [ATH]
Barley (Hordeum vulgare)
Tissues
  • 7-day old seedling leaf, Blumeria graminis f. sp. Hordei infected ref: [HVMI]
Brachypodium distachyon
Tissues
  • Root and shoot ref: [BMDN]
Corn (Zea mays)
Tissues
  • Endosperm ref: [ZMEN]
  • Immature ear and tassel inflorescence primordia, vegetative apices ref: [MAET]
  • Kernel ref: [ZEMAK]
  • Leaf and ovary ref: [MALO]
Grape (Vitis riparia)
Tissues
  • Leaf ref: [VIRIF]
Kalanchoe laxiflora
Tissues
  • Leaf ref: [KALAX]
Marchantia polymorpha
Tissues
  • Mixed tissues ref: [MAPA]
Medicago truncatula
Tissues
  • Root ref: [METRO]
  • Root, A. euteiches infected ref: [MOTA]
  • Whole plant and root, A. euteiches infected ref: [MTA17]
Morning glory (Ipomoea nil)
Tissues
  • Meristem ref: [CUMM]
  • Petal ref: [IPON]
Nicotiana benthamiana
Tissues
  • Mixed tissues ref: [NIB]
Orange (Citrus sinensis)
Tissues
  • Plant, Las infected ref: [CSIL]
Physcomitrella patens
Tissues
  • Protonema and gametophores ref: [PHPA]
Poplar (Populus tremula )
Tissues
  • L. x Populus tremuloides  (Leaves and Buds) ref: [ASLB]
Rapeseed (Brassica napus)
Tissues
  • Leaf, Leptosphaeria maculans infected ref: [BNLI]
Rice (Oryza sativa)
Tissues
  • Leaf and root ref: [RLR]
Soybean (Glycine max)
Tissues
  • Leaf and root, water stressed ref: [GMLR]
  • Leaf, shoot, root, B. japonicum inoculated ref: [SSRL]
Tobacco (Nicotiana tabacum)
Tissues
  • Leaf ref: [NITA]
Tomato (Solanum lycopersicum)
Tissues
  • Fruit ref: [TOFT]
  • Leaf, petiole, stem and root, TYLCV infected ref: [TOPLI]
  • Leaf, stem and petiole ref: [TOLE]
  • Meristem, leaf primordia and stem, floral bud ref: [TOM]
  • Ovary ref: [TOV]
  • Root, R. solanacaerarum and M. incognita infected ref: [TORI]
Wheat (Triticum aestivum)
Tissues
  • Head, leaf and root ref: [WHLR]
  • Leaf, Zymoseptoria tritici inoculated ref: [WLIZT]
  • Leaf, peduncle and grain ref: [TALPG]
Peas (Pisum sativum)
Tissues
  • Leaf and stem, ref. PSLS
Rodents
Mouse (Mus musculus)
Tissues
  • Brain adult ref: [AMB]
  • Brain embryo (mix of E10.5 and E12.5) ref: [MBE]
  • Brain embryo (mix of E14, E16 and E18) ref: [MB6E]
  • Embryonic stem cells (treated with CHIR and bFGF) ref: [MSCT]
  • Embryonic stem cells ref: [MESC]
  • Inner Ear E16.5 ref: [MOINE]
  • Inner Ear ref: [MIE]
  • Kidney adult ref: [MKI]
  • Kidney embryo ref: [MOKE]
  • Neurosphere adult ref: [MANE]
  • Ovary ref: [MMO]
  • Pancreatic beta-cells ref: [MPC]
  • Spleen ref: [MSPL]
  • Testis ref: [MUST]
Rat (Rattus norvegicus)
Tissues
  • Hippocampus ref: [RHC]
  • Rear brain ref: [RBP]
Insects
Drosophila melanogaster
Tissues
  • Adult head ref: [DMT]
  • Embryo (0-12h and 12-24h) ref: [DME]
  • Larvae brain ref: [DMLB]
  • Ovary ref: [DMOV]
  • Testis ref: [DMTES]
  • Third instar larvae ref: [DLTS]
Tiger mosquito (Aedes albopictus)
Tissues
  • Larvae cells ref: [AALC]
Other Model Organisms
Caenorhabditis elegans
Tissues
  • Embryo ref: [CEE]
  • Mixed stages ref: [CEMS]
Dictyostelium discoideum
Tissues
  • Vegetative, aggregative & slug stages ref: [DD]
Gallus gallus
Tissues
  • Lung ref: [GALU]
Xenopus laevis
Tissues
  • Embryo ref: [XLE]
Parasites
Botrytis cinerea
Cells
  • strain BO5.10 ref: [BOCI]
Green peach aphid
Cells
  • Myzus persicae ref: [MYPE]